How to Bake Gluten Free Bagels

Let’s start with a brief overview of bagel making. First you mix your dough. Then you form the dough into the bagel shape. After that, the bagels rest and rise. The fourth step is to boil the bagels, and then we let them air dry and put them in the oven to bake.

This is definitely not a quick recipe for a hurried morning! However, it is a fun recipe to make and you’ll may want to include a few family members in the bagel forming step. Definitely gather the entire household to watch the boiling process!

What’s In A Bagel?

The must have ingredients in a bagel are water, yeast, flour, salt, and of course xanthan gum since we’re making these GF.   Eggs, oil and sugar may be added in some recipes, but are not essential to a bagel.

The flour mix that I use in the recipe is my all-purpose flour mix: brown rice flour, cornstarch, garfava or sorghum flour, and masa harina.  If you are allergic to corn, substitute tapioca starch for the cornstarch, and coconut flour for the masa harina.   To the flour I add xanthan gum – 1 teaspoon for each cup of flour in the recipe.  If you decide to convert a bagel recipe that you find elsewhere, just replace the flour with my flour mix and add a teaspoon of xanthan gum for each cup of flour.

The recipe that I’m using for this lesson does contain eggs, oil and sugar.  The sugar helps feed the yeast and contributes to a darker crust. If you are avoiding added sugar, you can leave this out.  To compensate, let the bagels rest (and rise) for a longer period after you form them.  Bagels that have risen enough will quickly float to the top of the boiling water. If your bagels don’t, let them rest longer next time. It will take some experimentation, but if you take good notes each time you should be able to figure out the appropriate time within a few batches.

If you leave the eggs and oil out of the recipe, you will need to add water to compensate. Watch the video to see the texture of the dough, so that you can add water (1 Tablespoon at a time) until you get the right texture. You may also cut the amount of salt in half if you are watching your sodium.

The dough for bagels should be tacky, but easy to knead and work with.  When you knead the dough and roll it out into strips you should not have to use any flour on your board.  In fact, if you do flour your board then you won’t be able to join the dough into a circle.

How To Get the Hole Into A Bagel

There are two basic methods of forming a bagel. The first, and the one that I prefer and demonstrate in the video, is to roll the dough out into a long round cylinder and then form it into a circle.  I’m sure that most of you have done this with play-dough at some point in your life. The key to this method is to make sure that the ends of the dough are well connected. If they are not, then they may come apart in the boiling water. If that happens it’s not the end of the world. The taste  of the bagel is not affected, just the appearance.

The second method for forming the bagel is to form the dough pieces into balls and then use your hands to form a hold in the middle. Many of my students have found this method to be the easiest method. I hold the dough in both hands and use the thumb and forefinger of both hands to pinch a hold through the middle. Keeping my hands in the same position, I then work the dough around clockwise, spreading the hole larger as the dough turns. My RV kitchen has very limited counter space for rolling dough out, so this is the method that I used the last time I made bagels.

One interesting alteration of this technique that I found in Cook’s Illustrated showed the hole being formed with the end of a wooden spoon.  The bagel rested on a flat surface, with the end of the wood spoon stuck through the center of the bagel, perpendicular to the bagel. The spoon was then moved in a circular motion, causing the bagel to spin around the spoon and form a larger and larger circle.

After the bagels are formed, lay a barely damp kitchen towel over them and leave them to rest for 20 minutes. Many of the recipes that I read said that you should let the bagels rise overnight in the refrigerator. I have not tested this.  The bagels that I’ve made have just had the 20 minute rest and they turned out extremely well. I think that the additional rising time would allow a stonger yeasty taste to develop.  This is a recipe variation that is worth testing, especially if you plan well enough to make the dough the night before you’re going to want bagels.

Boiling and Baking the Bagel:

The key to making a good bagel is to boil the bagels and then bake them in a hot oven.  The bagels are boiled in water. Many recipes add salt, sugar, malt, honey, and or baking soda to the water.  The purpose of these additions is to increase the chewiness and shininess of the crust.  The amount of these ingredients, and the amount of water for boiling, is incredibly variable between the different recipes that I’ve studied – which leads me to believe that you can add them, or leave them out as you wish.  I did not note a significant difference when I added salt and sugar to the water and when I left the water plain. I have not tried malt (obviously – it’s not GF) or honey. Baking soda, however, makes a huge difference. The baking soda increases the pH of the water and the result is a much, much darker crust.

The amount of time that the bagels boil varies greatly between recipes too. Many recipes call for 1 minute of boiling on each side, but other recipes that seemed just as authoritative (e.g. recipes from former bagel shop owners) called for a longer boil of 3 minutes on each side. I averaged it out and have been doing a 3 minute boil on the first side and 1.5 minutes on the second side.

Once the bagels have boiled, they should be removed from the water and allowed to dry. I set them on a wire rack so that the water can drip off easily. If you are planning to add toppings to your bagel, add them while the bagel is still wet so that they will stick. If you sprinkle the toppings from a height of 12 inches you will get a much more even coating than if you sprinkle from a lesser height.  

The bagels should then be put into a pre-heated oven.  Oven temperatures vary in recipes, but after reading many, it seems that a hot oven is better. The lowest temperature that I’ve used is 350 degrees and it took the bagels 25-35 minutes to get a completely brown crust.  The highest temperature that I saw in a recipe was 500 degrees.  Some recipes said to bake the bagels on a baking sheet; others suggested a hot pizza stone.  I tested the accompanying recipes on a baking sheet at 350 degrees. If you use a higher temperature or a baking stone, then I would start checking the bagels at 15 minutes.  You’re looking for a completely browned crust.

Bagel Storage:

I’ll admit, we usually eat all of the bagels within 30 minutes of them coming out of the oven. However, I have managed to test refrigerator and freezer storage for leftover bagels and freezer storage won out.  Toasting the leftover bagels helps a great deal, whether they’ve been stored in the refrigerator or freezer.

12 Responses to “How to Bake Gluten Free Bagels”

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  1. Tjokro Hermanto says:

    My daughter is on yeast free diet too. Do you have suggestion to substitute yeast? Thanks, Hera

    • Mary Frances says:

      Tjokro, the usual substitute for yeast is baking powder and/or baking soda. However, baking powder and baking soda work differently than yeast and special mixing procedures would probably be necessary to get the bagel dough to rise using baking powder/soda. There’s a lot more information along those lines in the Gluten Free Bread 201 class.

  2. Abigail Fuchsel says:

    New to site as of 15 minutes ago. Couple of questions. Where can I find your Flour mixture? I too should not have yeast any suggestions? Looking forward to making the bagels first. Thank you Abby

    • Mary Frances says:

      Hi Abigail,

      The flour recipes is on the GFCS blog, but I”ve also just added it to the Online Cooking School site. Look over in the sidebar for a new section for “Frequently Referenced Posts” and you’ll find a link to the recipe.

  3. jessie says:

    Hi I have very slow internet and was wondering if you have a cookbook available or is everthing just online?

  4. susan says:

    got this email about bagels and it said I would be able to watch video but am not finding. it would be nice to watch one of your videos to see what it is like, am I missing something? and in your recipes do you use an all purpose flour or individual flour mixtures. I use all purpose flour from better batter, would it work in your recipes? thanks

    • Mary Frances says:

      Susan, the video that is available is one on how to make GF chicken tenders. I’ve opened up parts of two different classes so that anyone who is interested can see what a cooking class is like. The bagel video is only available once that class has been purchased.

      I use an all-purpose flour mix that I created and the recipe is formulated to be used with that particular mix. All of that information is in the recipes and articles that are included in the bagel course.

  5. Peggy Ehling says:

    Mary Frances–I’m hoping to make bagels this weekend. Have you ever made them with your No Corn For Me flour mix? I don’t have coconut flour on hand. Is there another flour I could try in place of the masa harina? Maybe buckwheat? Or Oat flour?

    • Mary Frances says:

      Sorry that I didn’t see this until today. I stay away from the computer and phone on Sundays =) I’ve not made them with the No Corn for Me mix, but someone has and there is a discussion in the comments of the cinnamon raisin recipes about that. Basically you just have to adjust the liquid down. I think buckwheat or oat would work fine too, but again the liquid will need to be slightly less.

      If you end up with too much liquids, then the only result will be that they may fall apart more easily during the boil. And they will be more tender and not so chewy.

  6. yvonne deconinck says:

    Hi Mary, Are you considering making a cookbook?

  7. Teresa Apperson says:

    Mary Frances, Are you going to make this page into a printable version?

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